Martin Jinye Zhang
Martin Jinye Zhang
Other namesJinye Zhang
Assistant Professor, Computational Biology Department, Carnegie Mellon University
Verified email at - Homepage
Cited by
Cited by
A single-cell transcriptomic atlas characterizes ageing tissues in the mouse
N Almanzar, ..., MJ Zhang, L Zhou, J Zou, TTM Consortium
Nature 583 (7817), 590-595, 2020
Longitudinal multi-omics of host–microbe dynamics in prediabetes
W Zhou*, MR Sailani*, K Contrepois*, Y Zhou*, S Ahadi*, SR Leopold, ...
Nature 569 (7758), 663-671, 2019
Ageing hallmarks exhibit organ-specific temporal signatures
N Schaum*, B Lehallier*, O Hahn*, ..., TTM Consortium, ..., SR Quake, ...
Nature 583 (7817), 596-602, 2020
Exploring patterns enriched in a dataset with contrastive principal component analysis
A Abid*, MJ Zhang*, VK Bagaria, J Zou
Nature communications 9 (1), 1-7, 2018
Determining sequencing depth in a single-cell RNA-seq experiment
MJ Zhang*, V Ntranos*, D Tse
Nature communications 11 (1), 1-11, 2020
Mouse aging cell atlas analysis reveals global and cell type-specific aging signatures
MJ Zhang, AO Pisco, S Darmanis, J Zou
Elife 10, e62293, 2021
Molecular hallmarks of heterochronic parabiosis at single-cell resolution
R Pálovics, A Keller, N Schaum, W Tan, T Fehlmann, M Borja, F Kern, ...
Nature 603 (7900), 309-314, 2022
Polygenic enrichment distinguishes disease associations of individual cells in single-cell RNA-seq data
MJ Zhang, K Hou, KK Dey, S Sakaue, KA Jagadeesh, K Weinand, ...
Nature genetics 54 (10), 1572-1580, 2022
Polymicrobial periodontal disease triggers a wide radius of effect and unique virome
L Gao, M Kang, MJ Zhang, M Reza Sailani, R Kuraji, A Martinez, C Ye, ...
npj Biofilms and Microbiomes 6 (1), 10, 2020
Medoids in almost-linear time via multi-armed bandits
V Bagaria*, G Kamath*, V Ntranos*, M Zhang*, D Tse
International Conference on Artificial Intelligence and Statistics, 500-509, 2018
Bandit-PAM: Almost Linear Time -Medoids Clustering via Multi-Armed Bandits
M Tiwari, MJ Zhang, J Mayclin, S Thrun, C Piech, I Shomorony
Advances in Neural Information Processing Systems 33, 2020
Fast and covariate-adaptive method amplifies detection power in large-scale multiple hypothesis testing
MJ Zhang, F Xia, J Zou
Nature communications 10 (1), 3433, 2019
Deep longitudinal multiomics profiling reveals two biological seasonal patterns in California
MR Sailani, AA Metwally, W Zhou, SMSF Rose, S Ahadi, K Contrepois, ...
Nature communications 11 (1), 4933, 2020
On the theoretical analysis of cross validation in compressive sensing
J Zhang, L Chen, PT Boufounos, Y Gu
2014 IEEE International Conference on Acoustics, Speech and Signal …, 2014
Adaptive monte carlo multiple testing via multi-armed bandits
M Zhang, J Zou, D Tse
International Conference on Machine Learning, 7512-7522, 2019
Neuralfdr: Learning discovery thresholds from hypothesis features
F Xia*, MJ Zhang*, JY Zou, D Tse
Advances in Neural Information Processing Systems, 1541-1550, 2017
A multi-dimensional integrative scoring framework for predicting functional variants in the human genome
X Li, G Yung, H Zhou, R Sun, Z Li, K Hou, MJ Zhang, Y Liu, T Arapoglou, ...
The American Journal of Human Genetics 109 (3), 446-456, 2022
Nisin probiotic prevents inflammatory bone loss while promoting reparative proliferation and a healthy microbiome
L Gao, R Kuraji, MJ Zhang, A Martinez, A Radaic, P Kamarajan, C Le, ...
NPJ biofilms and microbiomes 8 (1), 45, 2022
Mldemon: Deployment monitoring for machine learning systems
T Ginart, MJ Zhang, J Zou
International Conference on Artificial Intelligence and Statistics, 3962-3997, 2022
Germline genomic and phenomic landscape of clonal hematopoiesis in 323,112 individuals
MM Uddin, Z Yu, JS Weinstock, T Nakao, A Niroula, SM Urbut, S Koyama, ...
medRxiv, 2022.07. 29.22278015, 2022
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