| Altered oral viral ecology in association with periodontal disease M Ly, SR Abeles, TK Boehm, R Robles-Sikisaka, M Naidu, ... MBio 5 (3), 10.1128/mbio. 01133-14, 2014 | 176 | 2014 |
| The human urine virome in association with urinary tract infections TM Santiago-Rodriguez, M Ly, N Bonilla, DT Pride Frontiers in Microbiology 6, 127489, 2015 | 168 | 2015 |
| Microbial diversity in individuals and their household contacts following typical antibiotic courses SR Abeles, MB Jones, TM Santiago-Rodriguez, M Ly, N Klitgord, ... Microbiome 4, 1-12, 2016 | 156 | 2016 |
| Bacteriophage and their potential roles in the human oral cavity A Edlund, TM Santiago-Rodriguez, TK Boehm, DT Pride Journal of oral microbiology 7 (1), 27423, 2015 | 148 | 2015 |
| Human virome and disease: high-throughput sequencing for virus discovery, identification of phage-bacteria dysbiosis and development of therapeutic approaches with emphasis on … TM Santiago-Rodriguez, EB Hollister Viruses 11 (7), 656, 2019 | 139 | 2019 |
| Gut Microbiome of an 11th Century A.D. Pre-Columbian Andean Mummy TM Santiago-Rodriguez, G Fornaciari, S Luciani, SE Dowd, GA Toranzos, ... PloS one 10 (9), e0138135, 2015 | 133 | 2015 |
| Effects of long term antibiotic therapy on human oral and fecal viromes SR Abeles, M Ly, TM Santiago-Rodriguez, DT Pride PloS one 10 (8), e0134941, 2015 | 115 | 2015 |
| Paleomicrobiology: revealing fecal microbiomes of ancient indigenous cultures RJ Cano, J Rivera-Perez, GA Toranzos, TM Santiago-Rodriguez, ... PloS one 9 (9), e106833, 2014 | 74 | 2014 |
| Transcriptome analysis of bacteriophage communities in periodontal health and disease TM Santiago-Rodriguez, M Naidu, SR Abeles, TK Boehm, M Ly, DT Pride BMC genomics 16, 1-9, 2015 | 66 | 2015 |
| Interaction of bacterial metagenome and virome in patients with cirrhosis and hepatic encephalopathy JS Bajaj, M Sikaroodi, A Shamsaddini, Z Henseler, T Santiago-Rodriguez, ... Gut 70 (6), 1162-1173, 2021 | 60 | 2021 |
| Transmission of viruses via our microbiomes M Ly, MB Jones, SR Abeles, TM Santiago-Rodriguez, J Gao, IC Chan, ... Microbiome 4, 1-10, 2016 | 55 | 2016 |
| Microbial quality of tropical inland waters and effects of rainfall events TM Santiago-Rodriguez, RL Tremblay, C Toledo-Hernandez, ... Applied and environmental microbiology 78 (15), 5160-5169, 2012 | 54 | 2012 |
| Microbial communities in pre-columbian coprolites TM Santiago-Rodriguez, YM Narganes-Storde, L Chanlatte, ... PloS one 8 (6), e65191, 2013 | 52 | 2013 |
| Characterization of Enterococcus faecalis-infecting phages (enterophages) as markers of human fecal pollution in recreational waters TM Santiago-Rodríguez, C Dávila, J González, N Bonilla, P Marcos, ... Water research 44 (16), 4716-4725, 2010 | 52 | 2010 |
| Enterophages, a group of phages infecting Enterococcus faecalis and their potential as alternate indicators of human fecal contamination N Bonilla, TM Santiago-Rodriguez, P Marcos, M Urdaneta, ... Water Science and Technology 61, 293-300, 2010 | 52 | 2010 |
| General anesthesia alters the diversity and composition of the intestinal microbiota in mice MA Serbanescu, RP Mathena, J Xu, T Santiago-Rodriguez, TL Hartsell, ... Anesthesia & Analgesia 129 (4), e126-e129, 2019 | 51 | 2019 |
| Multi ‘omic data integration: A review of concepts, considerations, and approaches TM Santiago-Rodriguez, EB Hollister Seminars in Perinatology 45 (6), 151456, 2021 | 48 | 2021 |
| Taxonomic and predicted metabolic profiles of the human gut microbiome in pre-Columbian mummies TM Santiago-Rodriguez, G Fornaciari, S Luciani, SE Dowd, GA Toranzos, ... FEMS microbiology ecology 92 (11), fiw182, 2016 | 38 | 2016 |
| Dysregulated FXR-FGF19 signaling and choline metabolism are associated with gut dysbiosis and hyperplasia in a novel pig model of pediatric NASH GV Hernandez, VA Smith, M Melnyk, MA Burd, KA Sprayberry, ... American Journal of Physiology-Gastrointestinal and Liver Physiology 318 (3 …, 2020 | 37 | 2020 |
| Fecal viral community responses to high-fat diet in mice A Schulfer, TM Santiago-Rodriguez, M Ly, JM Borin, J Chopyk, MJ Blaser, ... MSphere 5 (1), 10.1128/msphere. 00833-19, 2020 | 37 | 2020 |
