Anton Korobeynikov
Anton Korobeynikov
Unknown affiliation
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Cited by
Cited by
metaSPAdes: a new versatile metagenomic assembler
S Nurk, D Meleshko, A Korobeynikov, PA Pevzner
Genome research 27 (5), 824-834, 2017
Assembling genomes and mini-metagenomes from highly chimeric reads
S Nurk, A Bankevich, D Antipov, A Gurevich, A Korobeynikov, A Lapidus, ...
Research in computational molecular biology., 158–170, 2013
Using SPAdes de novo assembler
A Prjibelski, D Antipov, D Meleshko, A Lapidus, A Korobeynikov
Current protocols in bioinformatics 70 (1), e102, 2020
Singular spectrum analysis with R
N Golyandina, A Korobeynikov, A Zhigljavsky
Springer Berlin Heidelberg, 2018
hybridSPAdes: an algorithm for hybrid assembly of short and long reads
D Antipov, A Korobeynikov, JS McLean, PA Pevzner
Bioinformatics 32 (7), 1009-1015, 2016
MGnify: the microbiome analysis resource in 2020
AL Mitchell, A Almeida, M Beracochea, M Boland, J Burgin, G Cochrane, ...
Nucleic acids research 48 (D1), D570-D578, 2020
BayesHammer: Bayesian clustering for error correction in single-cell sequencing
SI Nikolenko, AI Korobeynikov, MA Alekseyev
BMC genomics 14 (Suppl 1), S7, 2013
Basic singular spectrum analysis and forecasting with R
N Golyandina, A Korobeynikov
Computational Statistics & Data Analysis 71, 934-954, 2014
Petabase-scale sequence alignment catalyses viral discovery
RC Edgar, B Taylor, V Lin, T Altman, P Barbera, D Meleshko, D Lohr, ...
Nature 602 (7895), 142-147, 2022
Dereplication of microbial metabolites through database search of mass spectra
H Mohimani, A Gurevich, A Shlemov, A Mikheenko, A Korobeynikov, ...
Nature communications 9 (1), 4035, 2018
Critical assessment of metagenome interpretation: the second round of challenges
F Meyer, A Fritz, ZL Deng, D Koslicki, TR Lesker, A Gurevich, G Robertson, ...
Nature methods 19 (4), 429-440, 2022
Characterization of cyanobacterial hydrocarbon composition and distribution of biosynthetic pathways
RC Coates, S Podell, A Korobeynikov, A Lapidus, P Pevzner, ...
PloS one 9 (1), e85140, 2014
Combining mass spectrometric metabolic profiling with genomic analysis: a powerful approach for discovering natural products from cyanobacteria
K Kleigrewe, J Almaliti, IY Tian, RB Kinnel, A Korobeynikov, EA Monroe, ...
Journal of natural Products 78 (7), 1671-1682, 2015
Multivariate and 2D extensions of singular spectrum analysis with the Rssa package
N Golyandina, A Korobeynikov, A Shlemov, K Usevich
arXiv preprint arXiv:1309.5050, 2013
Generating lineage-resolved, complete metagenome-assembled genomes from complex microbial communities
DM Bickhart, M Kolmogorov, E Tseng, DM Portik, A Korobeynikov, ...
Nature biotechnology 40 (5), 711-719, 2022
ExSPAnder: a universal repeat resolver for DNA fragment assembly
AD Prjibelski, I Vasilinetc, A Bankevich, A Gurevich, T Krivosheeva, ...
Bioinformatics 30 (12), i293-i301, 2014
Computation-and space-efficient implementation of SSA
A Korobeynikov
arXiv preprint arXiv:0911.4498, 2009
MGnify: the microbiome sequence data analysis resource in 2023
L Richardson, B Allen, G Baldi, M Beracochea, ML Bileschi, T Burdett, ...
Nucleic Acids Research 51 (D1), D753-D759, 2023
Metagenomic data assembly–the way of decoding unknown microorganisms
AL Lapidus, AI Korobeynikov
Frontiers in Microbiology 12, 613791, 2021
Comparative genomics uncovers the prolific and distinctive metabolic potential of the cyanobacterial genus Moorea
T Leao, G Castelão, A Korobeynikov, EA Monroe, S Podell, E Glukhov, ...
Proceedings of the National Academy of Sciences 114 (12), 3198-3203, 2017
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