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Anton Korobeynikov
Anton Korobeynikov
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Title
Cited by
Cited by
Year
metaSPAdes: a new versatile metagenomic assembler
S Nurk, D Meleshko, A Korobeynikov, PA Pevzner
Genome research 27 (5), 824-834, 2017
28502017
Assembling genomes and mini-metagenomes from highly chimeric reads
S Nurk, A Bankevich, D Antipov, A Gurevich, A Korobeynikov, A Lapidus, ...
Research in computational molecular biology., 158–170, 2013
2025*2013
Using SPAdes de novo assembler
A Prjibelski, D Antipov, D Meleshko, A Lapidus, A Korobeynikov
Current protocols in bioinformatics 70 (1), e102, 2020
11072020
Singular spectrum analysis with R
N Golyandina, A Korobeynikov, A Zhigljavsky
Springer Berlin Heidelberg, 2018
9572018
hybridSPAdes: an algorithm for hybrid assembly of short and long reads
D Antipov, A Korobeynikov, JS McLean, PA Pevzner
Bioinformatics 32 (7), 1009-1015, 2016
5012016
MGnify: the microbiome analysis resource in 2020
AL Mitchell, A Almeida, M Beracochea, M Boland, J Burgin, G Cochrane, ...
Nucleic acids research 48 (D1), D570-D578, 2020
4772020
BayesHammer: Bayesian clustering for error correction in single-cell sequencing
SI Nikolenko, AI Korobeynikov, MA Alekseyev
BMC genomics 14 (1), 1-11, 2013
4772013
Basic singular spectrum analysis and forecasting with R
N Golyandina, A Korobeynikov
Computational Statistics & Data Analysis 71, 934-954, 2014
2942014
Petabase-scale sequence alignment catalyses viral discovery
RC Edgar, B Taylor, V Lin, T Altman, P Barbera, D Meleshko, D Lohr, ...
Nature 602 (7895), 142-147, 2022
2572022
Dereplication of microbial metabolites through database search of mass spectra
H Mohimani, A Gurevich, A Shlemov, A Mikheenko, A Korobeynikov, ...
Nature communications 9 (1), 4035, 2018
2472018
Characterization of cyanobacterial hydrocarbon composition and distribution of biosynthetic pathways
RC Coates, S Podell, A Korobeynikov, A Lapidus, P Pevzner, ...
PloS one 9 (1), e85140, 2014
1882014
Critical assessment of metagenome interpretation: the second round of challenges
F Meyer, A Fritz, ZL Deng, D Koslicki, TR Lesker, A Gurevich, G Robertson, ...
Nature methods 19 (4), 429-440, 2022
1732022
Combining mass spectrometric metabolic profiling with genomic analysis: a powerful approach for discovering natural products from cyanobacteria
K Kleigrewe, J Almaliti, IY Tian, RB Kinnel, A Korobeynikov, EA Monroe, ...
Journal of natural Products 78 (7), 1671-1682, 2015
1692015
Multivariate and 2D extensions of singular spectrum analysis with the Rssa package
N Golyandina, A Korobeynikov, A Shlemov, K Usevich
arXiv preprint arXiv:1309.5050, 2013
1532013
Research in computational molecular biology
S Nurk, A Bankevich, D Antipov, A Gurevich, A Korobeynikov, A Lapidus, ...
Proceedings of the 17th Annual International Conference, RECOMB 2013 …, 2013
1462013
Computation-and space-efficient implementation of SSA
A Korobeynikov
arXiv preprint arXiv:0911.4498, 2009
1222009
ExSPAnder: a universal repeat resolver for DNA fragment assembly
AD Prjibelski, I Vasilinetc, A Bankevich, A Gurevich, T Krivosheeva, ...
Bioinformatics 30 (12), i293-i301, 2014
1172014
Generating lineage-resolved, complete metagenome-assembled genomes from complex microbial communities
DM Bickhart, M Kolmogorov, E Tseng, DM Portik, A Korobeynikov, ...
Nature biotechnology 40 (5), 711-719, 2022
1132022
Comparative genomics uncovers the prolific and distinctive metabolic potential of the cyanobacterial genus Moorea
T Leao, G Castelão, A Korobeynikov, EA Monroe, S Podell, E Glukhov, ...
Proceedings of the National Academy of Sciences 114 (12), 3198-3203, 2017
912017
Metagenomic data assembly–the way of decoding unknown microorganisms
AL Lapidus, AI Korobeynikov
Frontiers in Microbiology 12, 613791, 2021
872021
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