Ashley Shade
Cited by
Cited by
A communal catalogue reveals Earth’s multiscale microbial diversity
LR Thompson, JG Sanders, D McDonald, A Amir, J Ladau, KJ Locey, ...
Nature 551 (7681), 457-463, 2017
Fundamentals of microbial community resistance and resilience
A Shade, H Peter, SD Allison, DL Baho, M Berga, H Bürgmann, DH Huber, ...
Frontiers in Microbiology 3, 2012
Beyond the Venn diagram: the hunt for a core microbiome
A Shade, J Handelsman
Environmental Microbiology 14 (1), 4-12, 2012
Conditionally Rare Taxa Disproportionately Contribute to Temporal Changes in Microbial Diversity
A Shade, SE Jones, JG Caporaso, J Handelsman, R Knight, N Fierer, ...
mBio 5 (4), e01371-14, 2014
Controls on soil microbial community stability under climate change
FT De Vries, A Shade
Frontiers in Microbiology 4, 265, 2013
Diversity is the question, not the answer
A Shade
The ISME Journal 11 (1), 1-6, 2017
A meta-analysis of changes in bacterial and archaeal communities with time
A Shade, JG Caporaso, J Handelsman, R Knight, N Fierer
The ISME journal 7 (8), 1493-1506, 2013
Ecological patterns of seed microbiome diversity, transmission, and assembly
A Shade, MA Jacques, M Barret
Current Opinion in Microbiology 37, 15-22, 2017
Meeting report: the terabase metagenomics workshop and the vision of an Earth microbiome project
JA Gilbert, F Meyer, D Antonopoulos, P Balaji, CT Brown, CT Brown, ...
Standards in genomic sciences 3 (3), 243, 2010
Genome-wide selective sweeps and gene-specific sweeps in natural bacterial populations
ML Bendall, SLR Stevens, LK Chan, S Malfatti, P Schwientek, J Tremblay, ...
The ISME journal 10 (7), 1589-1601, 2016
Lake microbial communities are resilient after a whole-ecosystem disturbance
A Shade, JS Read, ND Youngblut, N Fierer, R Knight, TK Kratz, NR Lottig, ...
The ISME journal 6 (12), 2153-2167, 2012
Culturing captures members of the soil rare biosphere
A Shade, CS Hogan, AK Klimowicz, M Linske, PS McManus, ...
Environmental Microbiology 14 (9), 2247-2252, 2012
Assembly and seasonality of core phyllosphere microbiota on perennial biofuel crops
KL Grady, JW Sorensen, N Stopnisek, J Guittar, A Shade
Nature Communications 10, 4135, 2019
Interannual dynamics and phenology of bacterial communities in a eutrophic lake
A Shade, AD Kent, SE Jones, RJ Newton, EW Triplett, KD McMahon
Limnology and Oceanography 52 (2), 487-494, 2007
Unexpected diversity during community succession in the apple flower microbiome
A Shade, PS McManus, J Handelsman
MBio 4 (2), e00602-12, 2013
The under-ice microbiome of seasonally frozen lakes
S Bertilsson, A Burgin, CC Carey, SB Fey, HP Grossart, LM Grubisic, ...
Limnology and Oceanography 58 (6), 1998-2012, 2013
The microbial ecology of flowers: an emerging frontier in phyllosphere research
K Aleklett, M Hart, A Shade
Botany, 2014
Resistance, resilience and recovery: aquatic bacterial dynamics after water column disturbance
A Shade, JS Read, DG Welkie, TK Kratz, CH Wu, KD McMahon
Environmental microbiology 13 (10), 2752-2767, 2011
Abundance-occupancy distributions to prioritize plant core microbiome membership
A Shade, N Stopnisek
Current Opinion in Microbiology 49, 50-58, 2019
The influence of habitat heterogeneity on freshwater bacterial community composition and dynamics
A Shade, SE Jones, KD McMahon
Environmental microbiology 10 (4), 1057-1067, 2008
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