| Integrated metagenomics/metaproteomics reveals human host-microbiota signatures of Crohn's disease AR Erickson, BL Cantarel, R Lamendella, Y Darzi, EF Mongodin, C Pan, ... PloS one 7 (11), e49138, 2012 | 494 | 2012 |
| Systematic comparison of label-free, metabolic labeling, and isobaric chemical labeling for quantitative proteomics on LTQ Orbitrap Velos Z Li, RM Adams, K Chourey, GB Hurst, RL Hettich, C Pan Journal of proteome research 11 (3), 1582-1590, 2012 | 382 | 2012 |
| Effects of Diet on Resource Utilization by a Model Human Gut Microbiota Containing Bacteroides cellulosilyticus WH2, a Symbiont with an Extensive Glycobiome NP McNulty, M Wu, AR Erickson, C Pan, BK Erickson, EC Martens, ... PLoS biology 11 (8), e1001637, 2013 | 317 | 2013 |
| Impact of pretreated switchgrass and biomass carbohydrates on Clostridium thermocellum ATCC 27405 cellulosome composition: a quantitative proteomic analysis B Raman, C Pan, GB Hurst, M Rodriguez Jr, CK McKeown, PK Lankford, ... PloS one 4 (4), e5271, 2009 | 289 | 2009 |
| Efficient and specific trypsin digestion of microgram to nanogram quantities of proteins in organic− aqueous solvent systems MB Strader, DL Tabb, WJ Hervey, C Pan, GB Hurst Analytical chemistry 78 (1), 125-134, 2006 | 232 | 2006 |
| Metaproteomics: Harnessing the Power of High Performance Mass Spectrometry to Identify the Suite of Proteins That Control Metabolic Activities in Microbial … RL Hettich, C Pan, K Chourey, RJ Giannone Analytical chemistry 85 (9), 4203-4214, 2013 | 213 | 2013 |
| Mediterranean grassland soil C–N compound turnover is dependent on rainfall and depth, and is mediated by genomically divergent microorganisms S Diamond, PF Andeer, Z Li, A Crits-Christoph, D Burstein, ... Nature microbiology 4 (8), 1356-1367, 2019 | 178 | 2019 |
| Community proteogenomics reveals the systemic impact of phosphorus availability on microbial functions in tropical soil Q Yao, Z Li, Y Song, SJ Wright, X Guo, SG Tringe, MM Tfaily, L Paša-Tolić, ... Nature ecology & evolution 2 (3), 499-509, 2018 | 155 | 2018 |
| MIDAS: a database-searching algorithm for metabolite identification in metabolomics Y Wang, G Kora, BP Bowen, C Pan Analytical chemistry 86 (19), 9496-9503, 2014 | 134 | 2014 |
| Microbial metaproteomics for characterizing the range of metabolic functions and activities of human gut microbiota W Xiong, PE Abraham, Z Li, C Pan, RL Hettich Proteomics 15 (20), 3424-3438, 2015 | 129 | 2015 |
| Improved genome annotation for Zymomonas mobilis S Yang, KM Pappas, LJ Hauser, ML Land, GL Chen, GB Hurst, C Pan, ... Nature biotechnology 27 (10), 893-894, 2009 | 119 | 2009 |
| Sigma: strain-level inference of genomes from metagenomic analysis for biosurveillance TH Ahn, J Chai, C Pan Bioinformatics 31 (2), 170-177, 2015 | 116 | 2015 |
| ProRata: a quantitative proteomics program for accurate protein abundance ratio estimation with confidence interval evaluation C Pan, G Kora, WH McDonald, DL Tabb, NC VerBerkmoes, GB Hurst, ... Analytical chemistry 78 (20), 7121-7131, 2006 | 115 | 2006 |
| Omega: an Overlap-graph de novo Assembler for Metagenomics B Haider, TH Ahn, B Bushnell, J Chai, A Copeland, C Pan Bioinformatics 30 (19), 2717-2722, 2014 | 114 | 2014 |
| Selenium-assisted nucleic acid crystallography: use of phosphoroselenoates for MAD phasing of a DNA structure CJ Wilds, R Pattanayek, C Pan, Z Wawrzak, M Egli Journal of the American Chemical Society 124 (50), 14910-14916, 2002 | 112 | 2002 |
| Proteogenomic analyses indicate bacterial methylotrophy and archaeal heterotrophy are prevalent below the grass root zone CN Butterfield, Z Li, PF Andeer, S Spaulding, BC Thomas, A Singh, ... PeerJ 4, e2687, 2016 | 108 | 2016 |
| Phage-induced expression of CRISPR-associated proteins is revealed by shotgun proteomics in Streptococcus thermophilus JC Young, BD Dill, C Pan, RL Hettich, JF Banfield, M Shah, C Fremaux, ... PloS one 7 (5), e38077, 2012 | 104 | 2012 |
| Quantitative tracking of isotope flows in proteomes of microbial communities C Pan, CR Fischer, D Hyatt, BP Bowen, RL Hettich, JF Banfield Molecular & Cellular Proteomics 10 (4), 2011 | 100 | 2011 |
| Characterization of anaerobic catabolism of p-coumarate in Rhodopseudomonas palustris by integrating transcriptomics and quantitative proteomics C Pan, Y Oda, PK Lankford, B Zhang, NF Samatova, DA Pelletier, ... Molecular & cellular proteomics 7 (5), 938-948, 2008 | 87 | 2008 |
| Cultivation and quantitative proteomic analyses of acidophilic microbial communities CP Belnap, C Pan, NC VerBerkmoes, ME Power, NF Samatova, ... The ISME journal 4 (4), 520-530, 2010 | 79 | 2010 |
