deniz akdemir
deniz akdemir
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Genomic Selection and Association Mapping in Rice (Oryza sativa): Effect of Trait Genetic Architecture, Training Population Composition, Marker Number and …
J Spindel, H Begum, D Akdemir, P Virk, B Collard, E Redona, G Atlin, ...
PLoS genetics 11 (2), e1004982, 2015
Integrating environmental covariates and crop modeling into the genomic selection framework to predict genotype by environment interactions
N Heslot, D Akdemir, ME Sorrells, JL Jannink
Theoretical and applied genetics 127, 463-480, 2014
Training set optimization under population structure in genomic selection
J Isidro, JL Jannink, D Akdemir, J Poland, N Heslot, ME Sorrells
Theoretical and applied genetics 128, 145-158, 2015
Genome-wide prediction models that incorporate de novo GWAS are a powerful new tool for tropical rice improvement
JE Spindel, H Begum, D Akdemir, B Collard, E Redoña, JL Jannink, ...
Heredity 116 (4), 395-408, 2016
Squamous cell and adenosquamous carcinomas of the gallbladder: clinicopathological analysis of 34 cases identified in 606 carcinomas
JC Roa, O Tapia, A Cakir, O Basturk, N Dursun, D Akdemir, B Saka, ...
Modern Pathology 24 (8), 1069-1078, 2011
Optimization of genomic selection training populations with a genetic algorithm
D Akdemir, JI Sanchez, JL Jannink
Genetics Selection Evolution 47, 1-10, 2015
Genomic prediction of gene bank wheat landraces
J Crossa, D Jarquín, J Franco, P Pérez-Rodríguez, J Burgueño, ...
G3: Genes, Genomes, Genetics 6 (7), 1819-1834, 2016
Multi-objective optimized genomic breeding strategies for sustainable food improvement
D Akdemir, W Beavis, R Fritsche-Neto, AK Singh, J Isidro-Sánchez
Heredity 122 (5), 672-683, 2019
Efficient breeding by genomic mating
D Akdemir, JI Sánchez
Frontiers in genetics 7, 210, 2016
Design of training populations for selective phenotyping in genomic prediction
D Akdemir, J Isidro-Sánchez
Scientific reports 9 (1), 1446, 2019
EMMREML: Fitting mixed models with known covariance structures
D Akdemir, UG Okeke
R package version 3 (1), 2015
Breeding value of primary synthetic wheat genotypes for grain yield
J Jafarzadeh, D Bonnett, JL Jannink, D Akdemir, S Dreisigacker, ...
PloS one 11 (9), e0162860, 2016
Accuracy of genomic selection to predict maize single-crosses obtained through different mating designs
R Fristche-Neto, D Akdemir, JL Jannink
Theoretical and Applied Genetics 131, 1153-1162, 2018
Accuracies of univariate and multivariate genomic prediction models in African cassava
UG Okeke, D Akdemir, I Rabbi, P Kulakow, JL Jannink
Genetics Selection Evolution 49, 1-10, 2017
Array variate random variables with multiway kro-necker delta covariance matrix structure
D Akdemir, AK Gupta
Journal of algebraic statistics 2 (1), 2011
Locally epistatic genomic relationship matrices for genomic association and prediction
D Akdemir, JL Jannink
Genetics 199 (3), 857-871, 2015
Genome wide association study of 5 agronomic traits in olive (Olea europaea L.)
HB Kaya, D Akdemir, R Lozano, O Cetin, H Sozer Kaya, M Sahin, ...
Scientific reports 9 (1), 18764, 2019
Genetic correlation, genome-wide association and genomic prediction of portable NIRS predicted carotenoids in cassava roots
UN Ikeogu, D Akdemir, MD Wolfe, UG Okeke, A Chinedozi, JL Jannink, ...
Frontiers in Plant Science 10, 1570, 2019
Genomic prediction using phenotypes from pedigreed lines with no marker data
B Ashraf, V Edriss, D Akdemir, E Autrique, D Bonnett, J Crossa, L Janss, ...
Crop Science 56 (3), 957-964, 2016
Genome-wide association analysis using R
J Isidro-Sánchez, D Akdemir, G Montilla-Bascón
Oat: Methods and Protocols, 189-207, 2017
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