Peter Beerli

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Scott V. EdwardsProfessor of Organismic and Evolutionary Biology, Harvard UniversityVerified email at fas.harvard.edu
Joe FelsensteinProfessor of Genome Sciences, and Professor of Biology, University of Washington, SeattleVerified email at gs.washington.edu
David BerriganNational Cancer InstituteVerified email at mail.nih.gov
Sacha VignieriAAAS/ScienceVerified email at aaas.org
Hopi HoekstraProfessor, Harvard University & Investigator, HHMIVerified email at oeb.harvard.edu
Jonathan HoekstraMountains to Sound Greenway TrustVerified email at mtsgreenway.org
Joel KingsolverProfessor of Biology, University of North Carolina-Chapel HillVerified email at bio.unc.edu
Jörg PlötnerMuseum für Naturkunde BerlinVerified email at mfn-berlin.de
Michal PalczewskiGoogle Inc.Verified email at fsu.edu
Raymond D. SemlitschUniversity of MissouriVerified email at missouri.edu
Çiğdem Akın PekşenBaskent UniversityVerified email at baskent.edu.tr
C. Can BilginMETUVerified email at metu.edu.tr
Patricia GibertCNRSVerified email at univ-lyon1.fr
John P. HuelsenbeckUniversity of California, BerkeleyVerified email at berkeley.edu
Robb BrumfieldLouisiana State UniversityVerified email at LSU.edu
Deborah A. NickersonUniversity of WashingtonVerified email at uw.edu
Mary KuhnerDepartment of Genome Sciences, University of WashingtonVerified email at uw.edu
Jianbing MuLMVR, NIAID, NIHVerified email at niaid.nih.gov
Xin-zhuan SuSenior Investigator, National Institute of Allergy and Infectious Diseases, National Institutes ofVerified email at niaid.nih.gov
Andrew RambautProfessor of Molecular Evolution, University of EdinburghVerified email at ed.ac.uk

Peter Beerli

Department of Scientific Computing, Florida State University

Verified email at fsu.edu - Homepage

Population genetics Phylogenetics Bayesian inference Model selection Demographic Inference


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The strength of phenotypic selection in natural populations JG Kingsolver, HE Hoekstra, JM Hoekstra, D Berrigan, SN Vignieri, ... The American Naturalist 157 (3), 245-261, 2001	2019	2001
Maximum likelihood estimation of a migration matrix and effective population sizes in n subpopulations by using a coalescent approach P Beerli, J Felsenstein Proceedings of the national academy of sciences 98 (8), 4563-4568, 2001	2011	2001
Maximum-likelihood estimation of migration rates and effective population numbers in two populations using a coalescent approach P Beerli, J Felsenstein Genetics 152 (2), 763-773, 1999	1256	1999
Perspective: gene divergence, population divergence, and the variance in coalescence time in phylogeographic studies SV Edwards, P Beerli Evolution 54 (6), 1839-1854, 2000	1085	2000
Comparison of Bayesian and maximum-likelihood inference of population genetic parameters P Beerli Bioinformatics 22 (3), 341-345, 2006	979	2006
The utility of single nucleotide polymorphisms in inferences of population history RT Brumfield, P Beerli, DA Nickerson, SV Edwards Trends in Ecology & Evolution 18 (5), 249-256, 2003	833	2003
Unified framework to evaluate panmixia and migration direction among multiple sampling locations P Beerli, M Palczewski Genetics 185 (1), 313-326, 2010	762	2010
BEAGLE: an application programming interface and high-performance computing library for statistical phylogenetics DL Ayres, A Darling, DJ Zwickl, P Beerli, MT Holder, PO Lewis, ... Systematic biology 61 (1), 170-173, 2012	690	2012
Estimating divergence times from molecular data on phylogenetic and population genetic timescales BS Arbogast, SV Edwards, J Wakeley, P Beerli, JB Slowinski Annual review of Ecology and Systematics 33 (1), 707-740, 2002	686	2002
Early origin and recent expansion of Plasmodium falciparum DA Joy, X Feng, J Mu, T Furuya, K Chotivanich, AU Krettli, M Ho, A Wang, ... science 300 (5617), 318-321, 2003	548	2003
Strength and tempo of directional selection in the wild HE Hoekstra, JM Hoekstra, D Berrigan, SN Vignieri, A Hoang, CE Hill, ... Proceedings of the National Academy of Sciences 98 (16), 9157-9160, 2001	491	2001
How to use MIGRATE or why are Markov chain Monte Carlo programs difficult to use P Beerli Population genetics for animal conservation 17, 42-79, 2009	381	2009
Effect of unsampled populations on the estimation of population sizes and migration rates between sampled populations P Beerli Molecular ecology 13 (4), 827-836, 2004	331	2004
Host Switch Leads to Emergence of Plasmodium vivax Malaria in Humans J Mu, DA Joy, J Duan, Y Huang, J Carlton, J Walker, J Barnwell, P Beerli, ... Molecular biology and evolution 22 (8), 1686-1693, 2005	254	2005
Global migration dynamics underlie evolution and persistence of human influenza A (H3N2) T Bedford, S Cobey, P Beerli, M Pascual PLoS pathogens 6 (5), e1000918, 2010	223	2010
Usefulness of single nucleotide polymorphism data for estimating population parameters MK Kuhner, P Beerli, J Yamato, J Felsenstein Genetics 156 (1), 439-447, 2000	207	2000
Geologically dated sea barriers calibrate a protein clock for Aegean water frogs P Beerli, H Hotz, T Uzzell Evolution 50 (4), 1676-1687, 1996	205	1996
Phylogeographic patterns of genetic diversity in eastern Mediterranean water frogs were determined by geological processes and climate change in the Late Cenozoic Ç Akın, C Can Bilgin, P Beerli, R Westaway, T Ohst, SN Litvinchuk, ... Journal of Biogeography 37 (11), 2111-2124, 2010	202	2010
In defence of model‐based inference in phylogeography MA Beaumont, R Nielsen, C Robert, J Hey, O Gaggiotti, L Knowles, ... Molecular ecology 19 (3), 436-446, 2010	195	2010
Gene flow and population structure in the Mexican blind cavefish complex (Astyanax mexicanus) M Bradic, P Beerli, FJ García-de León, S Esquivel-Bobadilla, ... BMC evolutionary biology 12, 1-17, 2012	192	2012

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