Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina) D Martinez, RM Berka, B Henrissat, M Saloheimo, M Arvas, SE Baker, ... Nature biotechnology 26 (5), 553-560, 2008 | 1388 | 2008 |
Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma CP Kubicek, A Herrera-Estrella, V Seidl-Seiboth, DA Martinez, ... Genome biology 12, 1-15, 2011 | 801 | 2011 |
Complete genome sequence of DSM 30083T, the type strain (U5/41T) of Escherichia coli, and a proposal for delineating subspecies in microbial taxonomy JP Meier-Kolthoff, RL Hahnke, J Petersen, C Scheuner, V Michael, ... Standards in genomic sciences 9, 1-19, 2014 | 529 | 2014 |
Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae J Chun, CJ Grim, NA Hasan, JH Lee, SY Choi, BJ Haley, E Taviani, ... Proceedings of the National Academy of Sciences 106 (36), 15442-15447, 2009 | 432 | 2009 |
Pathogenomic Sequence Analysis of Bacillus cereus and Bacillus thuringiensis Isolates Closely Related to Bacillus anthracis CS Han, G Xie, JF Challacombe, MR Altherr, SS Bhotika, D Bruce, ... Journal of bacteriology 188 (9), 3382-3390, 2006 | 297 | 2006 |
Genome Sequencing and Mapping Reveal Loss of Heterozygosity as a Mechanism for Rapid Adaptation in the Vegetable Pathogen Phytophthora capsici KH Lamour, J Mudge, D Gobena, OP Hurtado-Gonzales, J Schmutz, ... Molecular Plant-Microbe Interactions 25 (10), 1350-1360, 2012 | 288 | 2012 |
The complete genome sequence of Fibrobacter succinogenes S85 reveals a cellulolytic and metabolic specialist G Suen, PJ Weimer, DM Stevenson, FO Aylward, J Boyum, J Deneke, ... PloS one 6 (4), e18814, 2011 | 279 | 2011 |
Genome Sequence of the Cellulolytic Gliding Bacterium Cytophaga hutchinsonii G Xie, DC Bruce, JF Challacombe, O Chertkov, JC Detter, P Gilna, ... Applied and environmental microbiology 73 (11), 3536-3546, 2007 | 276 | 2007 |
Comparative genomics of freshwater Fe-oxidizing bacteria: implications for physiology, ecology, and systematics D Emerson, EK Field, O Chertkov, KW Davenport, L Goodwin, C Munk, ... Frontiers in microbiology 4, 254, 2013 | 217 | 2013 |
The sequence and analysis of duplication-rich human chromosome 16 J Martin, C Han, LA Gordon, A Terry, S Prabhakar, X She, G Xie, ... Nature 432 (7020), 988-994, 2004 | 200 | 2004 |
Genomic Comparison of Escherichia coli O104:H4 Isolates from 2009 and 2011 Reveals Plasmid, and Prophage Heterogeneity, Including Shiga Toxin Encoding … SA Ahmed, J Awosika, C Baldwin, KA Bishop-Lilly, B Biswas, S Broomall, ... PloS one 7 (11), e48228, 2012 | 138 | 2012 |
Genome Sequence of Hybrid Vibrio cholerae O1 MJ-1236, B-33, and CIRS101 and Comparative Genomics with V. cholerae CJ Grim, NA Hasan, E Taviani, B Haley, J Chun, TS Brettin, DC Bruce, ... Journal of bacteriology 192 (13), 3524-3533, 2010 | 127 | 2010 |
Complete genome sequence of the filamentous anoxygenic phototrophic bacterium Chloroflexus aurantiacus KH Tang, K Barry, O Chertkov, E Dalin, CS Han, LJ Hauser, BM Honchak, ... BMC genomics 12, 1-21, 2011 | 124 | 2011 |
Genome sequence of “Candidatus Frankia datiscae” Dg1, the uncultured microsymbiont from nitrogen-fixing root nodules of the dicot Datisca glomerata T Persson, DR Benson, P Normand, B Vanden Heuvel, P Pujic, ... Journal of Bacteriology 193 (24), 7017-7018, 2011 | 123 | 2011 |
Complete genome of the cellulolytic ruminal bacterium Ruminococcus albus 7 G Suen, DM Stevenson, DC Bruce, O Chertkov, A Copeland, JF Cheng, ... Journal of Bacteriology 193 (19), 5574-5575, 2011 | 110 | 2011 |
Non-contiguous finished genome sequence and contextual data of the filamentous soil bacterium Ktedonobacter racemifer type strain (SOSP1-21T) YJ Chang, M Land, L Hauser, O Chertkov, T Glavina Del Rio, M Nolan, ... Standards in genomic sciences 5, 97-111, 2011 | 103 | 2011 |
Complete genome assembly of Escherichia coli ATCC 25922, a serotype O6 reference strain TD Minogue, HA Daligault, KW Davenport, KA Bishop-Lilly, SM Broomall, ... Genome announcements 2 (5), 10.1128/genomea. 00969-14, 2014 | 99 | 2014 |
The Complete Genome Sequence of Bacillus thuringiensis Al Hakam JF Challacombe, MR Altherr, G Xie, SS Bhotika, N Brown, D Bruce, ... Journal of Bacteriology 189 (9), 3680-3681, 2007 | 91 | 2007 |
Completed Genome Sequence of the Anaerobic Iron-Oxidizing Bacterium Acidovorax ebreus Strain TPSY KG Byrne-Bailey, KA Weber, AH Chair, S Bose, T Knox, TL Spanbauer, ... Journal of bacteriology 192 (5), 1475-1476, 2010 | 88 | 2010 |
Whole Genome Sequences of Two Xylella fastidiosa Strains (M12 and M23) Causing Almond Leaf Scorch Disease in California J Chen, G Xie, S Han, O Chertkov, D Sims, EL Civerolo Journal of Bacteriology 192 (17), 4534-4534, 2010 | 85 | 2010 |