| QIIME allows analysis of high-throughput community sequencing data JG Caporaso, J Kuczynski, J Stombaugh, K Bittinger, FD Bushman, ... Nature methods 7 (5), 335-336, 2010 | 36139 | 2010 |
| Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns MG Dominguez-Bello, EK Costello, M Contreras, M Magris, G Hidalgo, ... Proceedings of the National Academy of Sciences 107 (26), 11971-11975, 2010 | 5866 | 2010 |
| Bacterial community variation in human body habitats across space and time EK Costello, CL Lauber, M Hamady, N Fierer, JI Gordon, R Knight science 326 (5960), 1694-1697, 2009 | 3977 | 2009 |
| The application of ecological theory toward an understanding of the human microbiome EK Costello, K Stagaman, L Dethlefsen, BJM Bohannan, DA Relman Science 336 (6086), 1255-1262, 2012 | 1592 | 2012 |
| Moving pictures of the human microbiome JG Caporaso, CL Lauber, EK Costello, D Berg-Lyons, A Gonzalez, ... Genome biology 12, 1-8, 2011 | 1358 | 2011 |
| Cohabiting family members share microbiota with one another and with their dogs SJ Song, C Lauber, EK Costello, CA Lozupone, G Humphrey, ... elife 2, e00458, 2013 | 1249 | 2013 |
| Temporal and spatial variation of the human microbiota during pregnancy DB DiGiulio, BJ Callahan, PJ McMurdie, EK Costello, DJ Lyell, ... Proceedings of the National Academy of Sciences 112 (35), 11060-11065, 2015 | 1217 | 2015 |
| Forensic identification using skin bacterial communities N Fierer, CL Lauber, N Zhou, D McDonald, EK Costello, R Knight Proceedings of the National Academy of Sciences 107 (14), 6477-6481, 2010 | 789 | 2010 |
| Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications P Yilmaz, R Kottmann, D Field, R Knight, JR Cole, L Amaral-Zettler, ... Nature biotechnology 29 (5), 415-420, 2011 | 755 | 2011 |
| Time series community genomics analysis reveals rapid shifts in bacterial species, strains, and phage during infant gut colonization I Sharon, MJ Morowitz, BC Thomas, EK Costello, DA Relman, JF Banfield Genome research 23 (1), 111-120, 2013 | 516 | 2013 |
| Supervised classification of human microbiota D Knights, EK Costello, R Knight FEMS microbiology reviews 35 (2), 343-359, 2011 | 501 | 2011 |
| Global patterns in the biogeography of bacterial taxa DR Nemergut, EK Costello, M Hamady, C Lozupone, L Jiang, SK Schmidt, ... Environmental microbiology 13 (1), 135-144, 2011 | 487 | 2011 |
| Biogeochemical consequences of rapid microbial turnover and seasonal succession in soil SK Schmidt, EK Costello, DR Nemergut, CC Cleveland, SC Reed, ... Ecology 88 (6), 1379-1385, 2007 | 409 | 2007 |
| Replication and refinement of a vaginal microbial signature of preterm birth in two racially distinct cohorts of US women BJ Callahan, DB DiGiulio, DSA Goltsman, CL Sun, EK Costello, ... Proceedings of the National Academy of Sciences 114 (37), 9966-9971, 2017 | 397 | 2017 |
| Distinct distal gut microbiome diversity and composition in healthy children from Bangladesh and the United States A Lin, EM Bik, EK Costello, L Dethlefsen, R Haque, DA Relman, U Singh PloS one 8 (1), e53838, 2013 | 371 | 2013 |
| The earliest stages of ecosystem succession in high-elevation (5000 metres above sea level), recently deglaciated soils SK Schmidt, SC Reed, DR Nemergut, A Stuart Grandy, CC Cleveland, ... Proceedings of the Royal Society B: Biological Sciences 275 (1653), 2793-2802, 2008 | 323 | 2008 |
| Sources of bacteria in outdoor air across cities in the midwestern United States RM Bowers, AP Sullivan, EK Costello, JL Collett Jr, R Knight, N Fierer Applied and environmental microbiology 77 (18), 6350-6356, 2011 | 319 | 2011 |
| Postprandial remodeling of the gut microbiota in Burmese pythons EK Costello, JI Gordon, SM Secor, R Knight The ISME journal 4 (11), 1375-1385, 2010 | 301 | 2010 |
| Genetically dictated change in host mucus carbohydrate landscape exerts a diet-dependent effect on the gut microbiota PC Kashyap, A Marcobal, LK Ursell, SA Smits, ED Sonnenburg, ... Proceedings of the National Academy of Sciences 110 (42), 17059-17064, 2013 | 297 | 2013 |
| Regulation of myocardial ketone body metabolism by the gut microbiota during nutrient deprivation PA Crawford, JR Crowley, N Sambandam, BD Muegge, EK Costello, ... Proceedings of the National Academy of Sciences 106 (27), 11276-11281, 2009 | 283 | 2009 |
