Whole genome-based population biology and epidemiological surveillance of Listeria monocytogenes A Moura, A Criscuolo, H Pouseele, MM Maury, A Leclercq, C Tarr, ... Nature microbiology 2 (2), 1-10, 2016 | 573 | 2016 |
Metagenomics: the next culture-independent game changer JD Forbes, NC Knox, J Ronholm, F Pagotto, A Reimer Frontiers in microbiology 8, 1069, 2017 | 296 | 2017 |
Comparative genomics of Vibrio cholerae from Haiti, Asia, and Africa AR Reimer, G Van Domselaar, S Stroika, M Walker, H Kent, C Tarr, ... Emerging infectious diseases 17 (11), 2113, 2011 | 194 | 2011 |
SNVPhyl: a single nucleotide variant phylogenomics pipeline for microbial genomic epidemiology A Petkau, P Mabon, C Sieffert, NC Knox, J Cabral, M Iskander, M Iskander, ... Microbial genomics 3 (6), e000116, 2017 | 147 | 2017 |
Sequence typing confirms that a predominant Listeria monocytogenes clone caused human listeriosis cases and outbreaks in Canada from 1988 to 2010 SJ Knabel, A Reimer, B Verghese, M Lok, J Ziegler, J Farber, F Pagotto, ... Journal of Clinical Microbiology 50 (5), 1748-1751, 2012 | 145 | 2012 |
Tolerance of Listeria monocytogenes to quaternary ammonium sanitizers is mediated by a novel efflux pump encoded by emrE J Kovacevic, J Ziegler, E Wałecka-Zacharska, A Reimer, DD Kitts, ... Applied and Environmental Microbiology 82 (3), 939-953, 2016 | 135 | 2016 |
Development and application of MLVA methods as a tool for inter-laboratory surveillance CA Nadon, E Trees, LK Ng, E Møller Nielsen, A Reimer, N Maxwell, ... Eurosurveillance 18 (35), 2013 | 124 | 2013 |
Drug-resistance mechanisms in Vibrio cholerae O1 outbreak strain, Haiti, 2010 M Sjölund-Karlsson, A Reimer, JP Folster, M Walker, GA Dahourou, ... Emerging infectious diseases 17 (11), 2151, 2011 | 111 | 2011 |
The Validation and Implications of Using Whole Genome Sequencing as a Replacement for Traditional Serotyping for a National Salmonella Reference Laboratory CA Yachison, C Yoshida, J Robertson, JHE Nash, P Kruczkiewicz, ... Frontiers in microbiology 8, 1044, 2017 | 87 | 2017 |
Public health genomics and the new molecular epidemiology of bacterial pathogens MW Gilmour, M Graham, A Reimer, G Van Domselaar Public Health Genomics 16 (1-2), 25-30, 2013 | 83 | 2013 |
Usefulness of high-quality core genome single-nucleotide variant analysis for subtyping the highly clonal and the most prevalent Salmonella enterica serovar Heidelberg clone in … S Bekal, C Berry, AR Reimer, G Van Domselaar, G Beaudry, E Fournier, ... Journal of clinical microbiology 54 (2), 289-295, 2016 | 79 | 2016 |
Highlighting clinical metagenomics for enhanced diagnostic decision-making: a step towards wider implementation JD Forbes, NC Knox, CL Peterson, AR Reimer Computational and structural biotechnology journal 16, 108-120, 2018 | 77 | 2018 |
Whole genome-based population biology and epidemiological surveillance of Listeria monocytogenes. Nat Microbiol 2: 16185 A Moura, A Criscuolo, H Pouseele, MM Maury, A Leclercq, C Tarr, ... | 76 | 2016 |
Legionella pneumophila monoclonal antibody subgroups and DNA sequence types isolated in Canada between 1981 and 2009: Laboratory Component of … AR Reimer, S Au, S Schindle, KA Bernard European journal of clinical microbiology & infectious diseases 29, 191-205, 2010 | 67 | 2010 |
Assignment of Brevibacterium stationis (ZoBell and Upham 1944) Breed 1953 to the genus Corynebacterium, as Corynebacterium stationis comb. nov., and emended … KA Bernard, D Wiebe, T Burdz, A Reimer, B Ng, C Singh, S Schindle, ... International journal of systematic and evolutionary microbiology 60 (4 …, 2010 | 63 | 2010 |
Evaluation of whole-genome sequencing for outbreak detection of Verotoxigenic Escherichia coli O157:H7 from the Canadian perspective J Rumore, L Tschetter, A Kearney, R Kandar, R McCormick, M Walker, ... BMC genomics 19, 1-13, 2018 | 56 | 2018 |
Gardnerella vaginalis Bacteremia in a Previously Healthy Man: Case Report and Characterization of the Isolate PRS Lagacé-Wiens, B Ng, A Reimer, T Burdz, D Wiebe, K Bernard Journal of clinical microbiology 46 (2), 804-806, 2008 | 52 | 2008 |
Genomic insights from whole genome sequencing of four clonal outbreak Campylobacter jejuni assessed within the global C. jejuni population CG Clark, C Berry, M Walker, A Petkau, DOR Barker, C Guan, A Reimer, ... BMC genomics 17, 1-16, 2016 | 42 | 2016 |
A Syst-OMICS approach to ensuring food safety and reducing the economic burden of salmonellosis JG Emond-Rheault, J Jeukens, L Freschi, I Kukavica-Ibrulj, B Boyle, ... Frontiers in microbiology 8, 996, 2017 | 38 | 2017 |
Economic evaluation of whole genome sequencing for pathogen identification and surveillance–results of case studies in Europe and the Americas 2016 to 2019 F Alleweldt, Ş Kara, K Best, FM Aarestrup, M Beer, TM Bestebroer, ... Eurosurveillance 26 (9), 1900606, 2021 | 33 | 2021 |